Posted 8mo ago

Postdoctoral Fellow - Computational Geneticist BF9491

@ Oklahoma State University
Stillwater, Oklahoma, United States
OnsiteFull Time
Responsibilities:Lead analyses, Characterize variants, Integrate multi-omics
Requirements Summary:PhD in Bioinformatics, Computational Genetics, Computer Science or related field; strong Python/R and genomics knowledge; experience with genome assembly, transcriptomics, variant identification; experience with Transformer and representation learning; excellent communication and teamwork.
Technical Tools Mentioned:Python, R, Genome Assembly, Variant Identification, Transformer, Representation Learning
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Job Description


246 Noble Research Center


Stillwater, Oklahoma 74078-3035


(405) 744-6189


Fax: (405) 744-7799


Web: http://biochemistry.okstate.edu


POSITION ANNOUNCEMENT


POSTDOCTORAL FELLOW


Computational Geneticist


Department of Biochemistry and Molecular Biology


Oklahoma State University


Stillwater, OK 74078


 


The Department of Biochemistry and Molecular Biology invites applications for the position of Postdoctoral fellow for Computational Geneticist


Position Description


Funding is available for a postdoctoral research position to work in the Department of Biochemistry and Molecular Biology at Oklahoma State University. For more information on the Department, please see https://agriculture.okstate.edu/departments-programs/biochemistry/. The applicant hired will work with the Chen laboratory (https://experts.okstate.edu/charles.chen) that focuses on identifying genomic variants key to adaptation in large and complex plant genomes.


The successful candidate will lead computational efforts to characterize the importance of genomic variants, including other features such as structural variants and variations at multi-omics level, for predictive analysis. Our overarching goal is to derive genomics-enabled solution for agricultural advancement, tree improvement, and genetic resource management in the face of climate uncertainty. Additionally, the postdoc will receive mentorship and opportunities for professional development opportunities tailored to their career goals.


This is an 11-month temporary 100% research, non-tenure track position. Appointments are to be made for a term of one year or less. Reappointments for a total period of not more than two years may be made. Review of applications will begin immediately and continue until the position is filled with a suitable applicant. 


Qualifications



  • Ph.D. in Bioinformatics, Computational Genetics, Computer Sciences, or related field.

  • Strong programming skill in Python, R, or programming languages for large-scale data analysis with in-depth knowledge in genomics, transcriptomics, and multi-modal data integration

  • Familiarity with genome assembly, annotation, transcriptomics, and variant identification, as well as computational methodologies such as optimization.

  • Experience with Transformer and Representation Learning.

  • Excellent communication skill, team collaboration abilities, and a passion for plant associative genomics and adaptation.


Benefit Highlights



  • Competitive compensation- full time employment with competitive compensation scale at federal agencies such as NSF in the USA and NSERC in Canada.

  • Dynamic work environment- be part of a highly dynamic multiple-disciplinary team environment across academia, government, and industry partnerships.      


How to Apply and Required Documents



  • Applicants must apply online at jobs.okstate.edu

  • A cover letter addressing research interest, experience and skills that fulfill the requirements.

  • A full C.V.

  • Most recent or most significant publications.

  • Contact information for 3 professional references.


To learn more about OSU Agriculture and Stillwater, visit these websites.